PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_10022-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 391aa    MW: 41171.1 Da    PI: 6.9628
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_10022-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.91e-09212260355
                      HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  TRIUR3_10022-P1 212 NSHSLAERLRREKISERMKLLQDLVPGC----SKVTGKAVMLDEIINYVQSLQ 260
                      58*************************9....556*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474595.37E-17207277IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.38E-11207264No hitNo description
PROSITE profilePS5088815.65209259IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-16210276IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.3E-7212260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003535.2E-11215265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MDMNESSEKG MEGNGSSGPG GGIPVEWQSQ FSGGGGFSAH HHQQHPHMMD SFASGMWPAA  60
SQHGAGFLAP VPGFLPPPGL GGHFPVDSGF IERAARSSCF VGPGSGGGMM GAGAFGGAGD  120
QHMGSAFGEG TLVRCSRTSL CFIQVMGGDQ VQSSNVAADS ANESAQSKDK GEESSPATGT  180
TTGGKSKGKG AKESSEKEDY IHVRARRGQA TNSHSLAERL RREKISERMK LLQDLVPGCS  240
KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL ATVNPRLDLN IEGLLSKDLL RFPGVSSSSM  300
GFSPEMMHPQ LQLSQPGLMQ GGAAAMANSD VFRRIMQAQL GAKDGSHSQM AHALNGPFSD  360
HVAQMAYPSM GSSHSHSQDL SIRPSQDAYQ M
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3627780.0AK362778.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2010A07.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003578282.11e-180PREDICTED: transcription factor bHLH49
RefseqXP_010238258.11e-180PREDICTED: transcription factor bHLH49
SwissprotQ9CAA91e-60BH049_ARATH; Transcription factor bHLH49
TrEMBLM7YB080.0M7YB08_TRIUA; Transcription factor bHLH49
STRINGBRADI4G32934.11e-180(Brachypodium distachyon)
STRINGSi029882m1e-179(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP29093785
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.31e-55bHLH family protein